Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNDMYNNIRLSVIQLI-----DSKKENLKENNIKLTIIKNEKDGYVVELDNDKCMAEIVVEE------PTYTPYRYISFE---VVSLMDGKVK----IIYSWYDDETSQW-SDIEKELNKGIQF--LNNFKTMEQ-------
2BW2 Chain:A ((1-140))
AEVEHYEPLQVHVQLEKVYLDGDVSIEHKHEKVFSMDDFWAAYAGWTLVEQKKG---YVLFRKQMDDISPLSKVNGYIGVSDNGVISTFHGRPEPASEPIQSFFQIDLERLESHMQKNLLKGIPFRTKAEFEDVIEHMKTYSG
General information:
TITO was launched using:
RESULT:
Template:
2BW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2565 for 661 contacts (-3.9/contact) +
2D Compatibility (PS) -11009 + (NN) 6309 + (LL) 408
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -12757.0 ( -19.30 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_2BW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BW2-query.scw
PDB file :
Tito_Scwrl_2BW2.pdb
: