Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFVGIDWLYM-----IFSTPIAFAMSQLITRVFAFLGLFLWARDYLIKDKKYLVPIYFVS--LAFALTPFWPSGMLSTLGMP----------LALWAFLNIRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVHIRFLLSMLYMGLIYVIVNYRFIYAMFLHPEPDSRSEFSLPNLSFLSSIRLSFKNFIFGHTHDQALAGYVILPILLLVLVLIIIKREWVKEKLFLWL-FGFNLFLSFW-----YGFWWYRGWNVIKEHVEIMRTFNFSRFHFLQP--------FLFYGLFALAIVYLIKKGNWWRKLAYVAIVLQLIVVFANNSEIYYRTGNGSPSI--NQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNSYPLAYKRAFRKIIAGELDKSPVLEDYYDNWGNRCYIFSAELGKNYDFGKDSKKHIKQLDF-NTEAFKKVGGEYVLSAVPIDNASEVGLQFEKAFDNKESYWKIYLYKATN |
| 4K3C Chain:A ((1-532)) | ----------------YNISEMRIIGDTQK--LDNELNQLLTHFK----AGQLFRKTELSIIEEQIKQILGDRGYGSAKVDLYPKFNEEDHTVQINFIVDAGRRIYVRKIRFEGNDVTADSTLRREMRQQEGAWLSTSAVSLAKSRLERTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSLGLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAY--KRKTYGASGTLGFPV-------DENNSYYLGLGYTHDKLRNV--EREYTREKYVNSMKFPINPQNSHYDRIQSADFDLSFGWNYNNLNRGYFPTAGSSANISGKLTLPGSDNKYYQVGTNFSGYIPLNSEHKW---------------VIATKGGLAYTNSFGGKEVPFYQLYSAGGMGSLRGFAG--------GSIGPKAIYYREDGFKAPSQDVIGGNAMVNASLELIIPAPFISDK----YQHNVRTSVFVDAATVW-NTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIGPLSFSYAKPIKKYAGDEIEQFQFTVGSTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247998 for 3682 contacts (-67.4/contact) +
2D Compatibility (PS) -52491 + (NN) 2448 + (LL) 7344
1D Compatibility (HY) -2800 + (ID) 4250
Total energy: -297747.0 ( -80.87 by residue)
QMean score : 0.066
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