Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VANKFKTLDKMVYNLLLEKIKNGELVPNEHLAEEKLAREFGVSRSPLRKAIATLTAQGIVSYHENSGAVLNDCIVDADRYVQLMETIEIFVDAAIAKAAHFG-YEMDLEKLYARMQEMERFSYLTDLENYFDAHHRFILCLISFAENPYQVRIVKQIFFQMVHFSDGINMFKSVEIREWTNKKSNQIYELLAEGKIELARKTIKSMFAELTIQAYR
3IHU Chain:A ((16-217))
------SASDTVFFGIMSGLELGTFVPGQRLVETDLVAHFGVGRNSVREALQRLAAEGIVDLQRHRGAVIRRL--SLQETLDVLDVAERMTGLLARAATRGSGNQPQVQALRASVQALVAAEKAQDGETFSNARRHFYRTLLEMGDNRELRRLFPTIHMPIVHAQHR---L--ASLRQMRLDDYRRIATAVLAGEPDAAEAAGAAHVKNVRGAIL-
General information:
TITO was launched using:
RESULT:
Template:
3IHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135751 for 1593 contacts (-85.2/contact) +
2D Compatibility (PS) -22032 + (NN) -12433 + (LL) 1380
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -177636.0 ( -111.51 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3IHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IHU-query.scw
PDB file :
Tito_Scwrl_3IHU.pdb
: