Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINYKDGLAVLPDGKIVSEYPFIPGIDASGVVVNSK--SDQFQVGDEVIVTSYDFGVSYFGGYSEFIRVPA-EWVVPLPDGLSLKEAMILGTA---GFTAALSVDALEFSGVTPNAGKIAVSGATGGVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVSREA--FQPEKVRALDKQLYAGAIDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLC--PMSK----RERIWNRLA-TDYKLTNLESLATEIAFSELPESLHQVMNGGVTGRYLVKVK |
| 3QWB Chain:A ((6-333)) | PEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP--CEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYIS-------NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYH--VKKG-DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNI--K--IYKTYPLRDYRTAAADIESRKTVGKLVLEIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152174 for 2663 contacts (-57.1/contact) +
2D Compatibility (PS) -33462 + (NN) -8480 + (LL) 620
1D Compatibility (HY) -13600 + (ID) 2550
Total energy: -209646.0 ( -78.73 by residue)
QMean score : 0.569
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