Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVPFVGNVRDGHEFVGQAREMGAVATFWQKNVPNPPTDFPVILVEDTLLALQELAAKYIQQVKPKVIAITGSNGKTTTKDIMAAIVETTY-KVHYTGGNFNNHIGLPYTILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLG-SREEIAKAKLEITAG-LNPSGILIYPHEETLLLG-NINGDFRQ-LTFGKSEAAEIYPLEIRAEAEGTSFITNWE--PELEIFVPIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSRLEWITT----KSGARILNDAYNSSPTALKTVLKTFMHMDSSGKPKYLVLADMLELGDLSTKLHQESAEVLENDTIQKVFLYGDAMK-----------AFGEVAESKIGQGKVHHFDTKESLETALLSEIKGNEWILVKGSYGM-GL-KDVVENLIIK |
| 1P3D Chain:A ((118-473)) | --------------------------------------------------------------------------------------------------------RHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGL----VKSAGKNAHLGASRYLIAEADESDA-----SFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLP-FYGLAVMCADDPVLMELVPKV-GRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDD-YGHHPTEVGVTIKAAREGWG-DKRIVMIFQPHR--YSRTRDLFDDFVQVLSQ--VDALIMLDVYAAGEAPIVGADSKSLCRSIRNLG-KVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESW--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150183 for 2896 contacts (-51.9/contact) +
2D Compatibility (PS) -35598 + (NN) -12398 + (LL) 9136
1D Compatibility (HY) -12400 + (ID) 2850
Total energy: -204293.0 ( -70.54 by residue)
QMean score : 0.505
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