Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFRENVLEILEEITETDEVVQNTNIKL-FDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK
2QNW Chain:A ((8-80))
--LLERVKDVVADQLGVDRARINPESNFIKDLD-ADSLDSVELVMAFEEKFGVSIPDEEASK--IATVQDALSYIEKA-
General information:
TITO was launched using:
RESULT:
Template:
2QNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36852 for 486 contacts (-75.8/contact) +
2D Compatibility (PS) -7700 + (NN) -2156 + (LL) 620
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -48938.0 ( -100.70 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_2QNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QNW-query.scw
PDB file :
Tito_Scwrl_2QNW.pdb
: