Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEVMIKATGLEKSFKKTEVLKGVDFEVKHGEIFALLGSNGAGKTTTIQILATLLKADNGNAHISGFDVKTEP--EKVRKHISLTGQFAAVDGLLTGRENILLIAKLRGEKNPAQT---ADDLLARFGLEKAADRRADTYSGGMTRRLDIAMSLVGSPDVIFLDEPTTGLDPEGRMEVWKTIKTLSDGGTTILLTTQYLDEAEQLADRIAILHGGTIIANGTLDELKKLFPPAEVEYIEKQPSLEEIFLAIINGKEEVK |
4P33 Chain:B ((3-223)) | -----LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -98162 for 1720 contacts (-57.1/contact) +
2D Compatibility (PS) -23190 + (NN) -6554 + (LL) 3616
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -144640.0 ( -84.09 by residue)
QMean score : 0.566
|
|
|