Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDE-----LLGIDYVIPDYSYLVKNKDKIKGLFITHGHEDHIGGVPYLLRD--LNIPIYAGKLASALIRNKLEEHGL-L----------------RQTKIYEYEEDDVFKFR-KTSISFFRTTHSIPDTYGIVVKTP--SGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDV---EGRIIFATFASNIYRLQQVVESSIETGRK------IAVFGRSMESAMEIGKQL-GYIQA--------------PKDTFID---VHQLNK-TPAGNVTILCTGS----QGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSV-NRTINLLYQAG----AEVIHGK--VNN-IHTSGHGGQQEQKLMLRLMK--PKFFMPIHGEFRMQKIHAESAE-ECGVPEENSFIMANGDVLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGFIYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV |
| 3AF5 Chain:A ((186-650)) | -----SRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFD--APEFQYVL-REGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGH-ILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPA---N-AK--FPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIWE-ATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLA--------PDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGI---STRAPNNLDTIRL----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157983 for 3484 contacts (-45.3/contact) +
2D Compatibility (PS) -43579 + (NN) -22246 + (LL) 11500
1D Compatibility (HY) -18000 + (ID) 4500
Total energy: -234808.0 ( -67.40 by residue)
QMean score : 0.472
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