Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYRLVSER-QFEEANIEEA-L-TEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATGEFEIGTKVVMIPNTPTEDD---PVIAENYRRSSLFRSS---GYDGLMQENVFMRRDRVVRLPENMDMEVAA-YSELISVAFHAITRFKQK-----------ANANQSVFGVWGDGNLGFITCLLLKTIYPESKVIIFGKTQY-KLDFF--S-FVDEAHLVDE----I-PEGLVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENP-IEFNS---RMVLEKGLTVFGSSRSGKEDFQNTVNFLSENERA-VEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGKTVMEWKV |
| 2CDC Chain:A ((1-363)) | --MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKL------GKDFLVLGHEAIGVVEESYH-GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLAD--IEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRT-YG-LEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD--VNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVS---INDEKELLKVLREKEHGEIKIRI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121973 for 2574 contacts (-47.4/contact) +
2D Compatibility (PS) -33956 + (NN) -7736 + (LL) 1332
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -177183.0 ( -68.84 by residue)
QMean score : 0.398
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