Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGVVKDYAYYKSLTTL------GDSNLAIMEYDVKILDETKVLSYYKLKNLS--E--NNYTMRSNIW-IFENGSWKLTFHQGTRII
3BB9 Chain:A ((26-148))
-IGVDSAAGNVVKQFHAALQMGNEAIVRQSLAANVQIYEGGKVERSLTEYANHHMLADMAYLKGLTITPKEHQIT-ITGDIAISTSISHAQGEYKSIDSMTMETLVLIKQADGRWKITHVHWS---
General information:
TITO was launched using:
RESULT:
Template:
3BB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30075 for 738 contacts (-40.8/contact) +
2D Compatibility (PS) -11752 + (NN) 128 + (LL) 920
1D Compatibility (HY) 2000 + (ID) 600
Total energy: -39379.0 ( -53.36 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_3BB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BB9-query.scw
PDB file :
Tito_Scwrl_3BB9.pdb
: