TITO

Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)

Input alignment information:

Query sequence

MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNV----PLFG----------------AF--------EFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANV-IESAGMEALYTIDEPTAAAAVLD--------LQNGAVVDVGGGTTGISVFENGEVIYT--ADEPTGGTHMTLVLAGYYG---------VPVEEAEQNKRAQKDSS---------------------------------------EH---FSVMRPV------VEKMAEITRVHLEKS-------PSEPLYIVGGASAYSQFKDTFESYLKMPV--------------------FQPNYPQYVTPLGIAMSSGSENL

1K8K Chain:A ((3-388))

----------------------------GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKEVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLR-AEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSKPKPIDVQVITHHMQRYAVWFGGSMLASTP--

General information:

TITO was launched using:	RESULT:
Template: 1K8K.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output	3D Compatibility (PKB) -64024 for 1942 contacts (-33.0/contact) + 2D Compatibility (PS) -25952 + (NN) -2784 + (LL) 2992 1D Compatibility (HY) -6400 + (ID) 2250 Total energy: -98418.0 ( -50.68 by residue) QMean score : 0.287

(partial model without unconserved sides chains):
PDB file : Tito_1K8K.pdb:

(Unconserved sides chains are recalculated) :
Sequence: align-1K8K-query.scw
PDB file : Tito_Scwrl_1K8K.pdb: