Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEG---RDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEA-LIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEF-GVV-A-DPTW------DAP-----RTDLIQSISFHNKEKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 1IBJ Chain:A ((123-399)) | --------------------------------------------------GPYDYTRSGNPTRDALESLLAKLDKADRAFC---FTSGMAALSAVT-HLIKNGEEIVA-GDDVYGGSDRLL------SQVVPRSGVVVKRVNTT-----KLDEVAAAIGPQTKLVWLESP----TNPRQQISDIRKISEMAHAQ--GALVLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNS--EGS--GLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKY------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142676 for 2164 contacts (-65.9/contact) +
2D Compatibility (PS) -27867 + (NN) -13696 + (LL) 9512
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -185227.0 ( -85.59 by residue)
QMean score : 0.362
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