Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDVVGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDDDTTSSDTTGGQ |
| 4DZN Chain:A ((1-32)) | -----------------------------------------------------------------------------------GEIAALKQEIAALKKEIAALKEIAALKQGYY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DZN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6387 for 111 contacts (57.5/contact) +
2D Compatibility (PS) -3352 + (NN) -2572 + (LL) 14228
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 11691.0 ( 105.32 by residue)
QMean score : 0.788
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