Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGFGNKDIGIDLGTANTLVYMKGKGIVLREPSVVAMKKD------------TQEIVAVGSDAKNMIGRTPGNIVAIRPMKDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVMICVPSGITGVEKRAVIDATRQA--------------GAKDAFTIEEPFAAAIGAGLPV---GEPTGSMVVDIGGGTTEVAVISLG--GI--VTSRSVRTAGDDLDEVIINYIRKKYNLLIGDRTAEAIKMEIGSASPKGLDLSPFSIRGRDLVTGLPKTIEITPEEISEALADTVAAIIDAVKGTLENTPPELSADIMDKGIVLTGGGALLRNLDTVISEETKM-PVII-ADEPLDCVAIGTGKALENMDMYKRKKMN |
| 2FSJ Chain:A ((21-344)) | -----MVVVGLDVGYGDTKVIGVDG-KRIIFPSRWAVTETESWKIPVLSTDGGQTKFIYGKYASGNN--------IRVPQGDGRLASKEAFPLIAAALWESGIHN--PVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVPFDLAQEALSH------------PVMFRQ--------KQVGG-PEVSGPILEDLANRIIENIRLNLRGEVDR------VTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAER---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93964 for 2368 contacts (-39.7/contact) +
2D Compatibility (PS) -30101 + (NN) -11210 + (LL) 2032
1D Compatibility (HY) -800 + (ID) 2900
Total energy: -136943.0 ( -57.83 by residue)
QMean score : 0.398
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