Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGTTTIGIDLGTANILVYSKEK-GIILNEPSVVALNTND------GTVLAIGQEAKEMIGKTPTSISAVRPMKDGVIADFDLTSGLLREIMRRISVSGVRKPNVVVCTPTGATSVERRAISDAV-RSTGARSVVLIEEPVAAAIGADLPVA---EPVANVIVDIGGGTSEIAIISYGGVVSS--TSIRTGGDHMDEEIIQYIRKNYN---LLIGQTTAERIKMELGYA-PIEHVTQTAD------------IRGRDLLTGLPKTIQVSSTEI---QSALAET------LQRILEAIRNTLELCPPELSGDIVDRGIILSGGGSLLQGFRDWLVEEIDVPV--------------------HMAPSPLESVAIGTGRSLVFADKLAKN |
| 1K8K Chain:A ((4-388)) | --RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKE--VMKGVDDLDFFIGDEAIEK-----PTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLV--KEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKN-IVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSKPKPIDVQVITHHMQRYAVWFGGSMLASTP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161556 for 2461 contacts (-65.6/contact) +
2D Compatibility (PS) -33579 + (NN) -10559 + (LL) 556
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -218738.0 ( -88.88 by residue)
QMean score : 0.467
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