Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIE---MMASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ
1LVG Chain:A ((5-194))
-----RPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQALSEEIKKAQG-------------
General information:
TITO was launched using:
RESULT:
Template:
1LVG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53298 for 1431 contacts (-37.2/contact) +
2D Compatibility (PS) -20769 + (NN) -12342 + (LL) 1664
1D Compatibility (HY) -9600 + (ID) 3400
Total energy: -97745.0 ( -68.31 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1LVG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LVG-query.scw
PDB file :
Tito_Scwrl_1LVG.pdb
: