Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VLQTEMKVIQQTEIADKVYELILTGEC---VAGMSPGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRVE-----------GDGTRDFSKLSEGDTIDVLGPLGKG-------FDIDTT-PAPKTALLIGGGIGVPPMYQLGKELAEK----GVQVMFVNGFQSAKDSFYAQEMAEYG-----TVH--IATVD------GSLGTQGFVTD-ITKNFP---EEPDVIYSCGPKAMLQAVKA-SFPETKTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL |
| 2CND Chain:A ((12-259)) | --RIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGPPPMIQFAISPNLEKM------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116596 for 1492 contacts (-78.1/contact) +
2D Compatibility (PS) -22461 + (NN) -5640 + (LL) 3476
1D Compatibility (HY) -13600 + (ID) 2250
Total energy: -157071.0 ( -105.28 by residue)
QMean score : 0.428
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