Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEAKNSADAFLELAIPWVNKERPPYLGELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQSTKYTLTRVRDFLKRKEELM
1W9G Chain:A ((1-102))
----MSHTILLVQP--------TKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNP---NSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYN----KDWIKEKIYVLLRRQAQQA
General information:
TITO was launched using:
RESULT:
Template:
1W9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5331 for 632 contacts (-8.4/contact) +
2D Compatibility (PS) -11050 + (NN) -3394 + (LL) 1952
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -21273.0 ( -33.66 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1W9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W9G-query.scw
PDB file :
Tito_Scwrl_1W9G.pdb
: