Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLLLALITVVLTVGACSDNKKETEEKANKTEEESATFLTTISTKDFK-QKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYNTDKASEKSRDNMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE
1FB6 Chain:A ((11-111))
-------------------------------------------DVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP--------GIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY------
General information:
TITO was launched using:
RESULT:
Template:
1FB6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35371 for 722 contacts (-49.0/contact) +
2D Compatibility (PS) -11018 + (NN) -8436 + (LL) 4728
1D Compatibility (HY) -7600 + (ID) 1000
Total energy: -58697.0 ( -81.30 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_1FB6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FB6-query.scw
PDB file :
Tito_Scwrl_1FB6.pdb
: