Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYQLVIVGYGGM-GSYHVTLASAADNLEVHGVFDILEEKREAA-AEKG-LKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKVNKHFMVHQNRRW-DEDFLIIKEIFEQKTIGEMFHLESRVHGAN--GIPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSN-VKSVSANLSFAL---GDEVDDGFVTFITFENGITAQIEVGTTNFIK-----LPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
| 3U3X Chain:A ((26-355)) | --ELRFAAVGLNHNHIYGQVNCLLR-AGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELVAAGAIGEVVHIVGLGPHRLRRETRPDWFFRRADYGGILTDIASHQCEQFLFFTGVNDATVLSASVGNQSVPDAPELQDTGSIHLST-GRTTGMIHVNWLTPEGMPTWGDGRLFIVGTSGTIEVRKTVDL---AGREGG---N---HLFL-------A-D-RN-GVEH--I-DCSRVDLPFGRQFLADIRDRTETAMPQERCFKAMELALQAQAIAE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201758 for 2675 contacts (-75.4/contact) +
2D Compatibility (PS) -34662 + (NN) -15071 + (LL) 1716
1D Compatibility (HY) -4800 + (ID) 2900
Total energy: -257475.0 ( -96.25 by residue)
QMean score : 0.525
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