Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVN-EDGKLTGHITDGLGFIANLRDASVDVAGKKMTIIGAGGAATAIQVQ-CALDGAKEITIFNIKDAFYDKAKQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCK-TVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDLYFN
1NYT Chain:D ((6-254))-------------VFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTIT------------NRTV-SRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGI---SGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHG--------------


General information:
TITO was launched using:
RESULT:

Template: 1NYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101316 for 2048 contacts (-49.5/contact) +
2D Compatibility (PS) -25999 + (NN) -3081 + (LL) 2460
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -146536.0 ( -71.55 by residue)
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_1NYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NYT-query.scw
PDB file : Tito_Scwrl_1NYT.pdb: