Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSRVLNQLNVPSLATGFLGGFTGSFIKDWLQNEGVKTGFVTVKDDTRINIKLKH-GEETEINGLGPAISE----KEINEFLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMIDTTGQE---LLDALPNRPILIKPNHHELADLFGVKLGS-VEELIPYGKKCLELGAQHVIVSMAGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATGGATAFSTD--LAQKELIDELLPQVKITKITGRN |
2JG1 Chain:A ((21-330)) | MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQMMEK---VEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENP-YKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYVNLNNYDDLFNQIEVLEV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141517 for 2480 contacts (-57.1/contact) +
2D Compatibility (PS) -31856 + (NN) -3889 + (LL) 148
1D Compatibility (HY) -20000 + (ID) 5000
Total energy: -202114.0 ( -81.50 by residue)
QMean score : 0.545
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