Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHIKFDYSKALRFFEERELDYL-----EPAVKAAHDSLHNGT---GAGNDALGWINLPTD--------------YDKEEFARIKKATEKIH---------SDSDVLIVIGIGGSYLGARAAIETLNHSFYNVLEKGARKTPQVFFAGNSISSSYLHDLIEVVGDRDFSVNVISKSGTTTEPAIAFRVFKELLIKKYGEEG-AKKRIYATTDKAKGALKTLSDNEGYETFVVPDDVGGRFSVLTAVGLLPIAVSGVD-IDALMNGAAAASKDFDKPEL-KNNIAYQYAAARNVLYR-KGKVTELLISYEPGLQYFNEWWKQLFGESEGKDK----------KGIYPSSANFSTDLHSIGQYIQDGRRNLFETVIKVDKPRHNLT------INKEDVDLDGLNYLAGETV----DFVNTKAFEGT----LLAHT--DGEVPNFVVEVPELDAYTFGYLVYFFEKAVAISGYLNGVNPFDQPGVEAYKANMFALLGKPGFEDKKAELEKRLND |
| 3LJK Chain:A ((41-522)) | --NIYFDYSKNL--INDYILKSLLESAEKSSLKDKIKQMFNGAKINSTEHRAVLHTALRDLSSTPLIVDGQDIRQEVTKEKQRVKELVEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQPYHC--------TDLKVHFV-SNVDADSLLQALHVVDPETTLLIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSK-LDKVKEFGID-LEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKHF-KETEFSKNIPVIMALLASYYSCTYNSQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGETVNYQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATSHHNYDNHQQALLANC--FAQSQALMFGQSYDMVYNELLKSGLNETQAKELAAHKVIPGNRPSTTILLDELSPYSLGALIALYEHKIFVQGVLWDINSYDQWGVELGKKLGKNILKAMNDDS----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152321 for 3373 contacts (-45.2/contact) +
2D Compatibility (PS) -46303 + (NN) -30225 + (LL) 1976
1D Compatibility (HY) -22400 + (ID) 5150
Total energy: -254423.0 ( -75.43 by residue)
QMean score : 0.483
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