Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEIDKLRHSATAALFE-RRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQYDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREHVSIFPASHFVTRPDIMKKAIVNIKAELEDRLKVLRADNKLLEAQRLEQRTNYDLEMMEEMGYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQMLVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDPIVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVKTLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGRAARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATSAADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG |
| 3HJH Chain:A ((5-450)) | -----YRYTLPVKAGE-----------------QRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQM-----VMNLADWETLPY---------DSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMG-SELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPT-----------------DKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLP----PLFSYFPANTLLVNTGD---------------------------LETSAERFQADTLARFENRGV-----------------DPMRPLLPPQSLWLR--------------VDELFSELKNWPRVQLKTEHLPTKAANANL-------------GFQKLPDLAV----------------------------------------QAQQKAPLDALRKFLETFDGPVVFSV------------ESEGRREALGELLARIKIAPQRIM----------------------RLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122663 for 3557 contacts (-34.5/contact) +
2D Compatibility (PS) -46959 + (NN) -4604 + (LL) 16204
1D Compatibility (HY) -15200 + (ID) 4400
Total energy: -177622.0 ( -49.94 by residue)
QMean score : 0.397
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