Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTETAEKVEYIIETKDVDLFYGSKQALQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENV-----QDPKIDMVN------LRKKVGMVFQQANPFP-FSIYDNVAYGP-RMHGIKDKKVLDEIVERSLRQAALWEEVHDRLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKD-YTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG |
1B0U Chain:A ((11-255)) | ----------------DLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEK-----PSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSK----HDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99865 for 1840 contacts (-54.3/contact) +
2D Compatibility (PS) -25779 + (NN) -15953 + (LL) 2704
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -158993.0 ( -86.41 by residue)
QMean score : 0.492
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