Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKQVALYIAVSLDGYIADENGSVEWLESIDSEGDAGYEAFFDNVDTVVMGRTTYQQIFS-LT-DT----FP----------YS---------KKDVYVFSNTKAGTKDEYADF--VAGTVDTWLNNID---GEKIWLVGGAKLVQQFLKERAIDRFVITIAPIILGKGIPLFEED-----QEHALELEEVTRFGQFAQLTYKNLEEN
2HXV Chain:A ((158-357))
-KRPFVALKYASTLDGKIADHRGDSKWITDKL---RFKVHEMRNIYSAVLVGAGTVLKDNPQLTCRLKEGRNPVRVILDRKGVLSGKVFRVFEENARVIVFTESEEAEYPPHVEKALSDCSVESILRNLYERDIDSVLVEGGSKVFSEFLDH--ADVVFGFYSTKIFGKGLDVFSGYLSDVSVPPKFKVVNVEFSDSEFLVEMRPC---
General information:
TITO was launched using:
RESULT:
Template:
2HXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90647 for 1192 contacts (-76.0/contact) +
2D Compatibility (PS) -17615 + (NN) 164 + (LL) 484
1D Compatibility (HY) -10800 + (ID) 1850
Total energy: -120264.0 ( -100.89 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_2HXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HXV-query.scw
PDB file :
Tito_Scwrl_2HXV.pdb
: