Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTNLIQLPGIGKKMVLMLNEIGIEEVADLRGRNPLELYEDTCDKRGERMDPCVLYTYRCAVYVAETDEAEQDVDLRKWWNWKDKQHTNERNLKNE
1PZN Chain:A ((35-90))
--RSIEDLPGVGPATAEKLREAGYDTLEAIAVASPIELKEVAG-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17325 for 242 contacts (-71.6/contact) +
2D Compatibility (PS) -4588 + (NN) -3448 + (LL) 3656
1D Compatibility (HY) -400 + (ID) 550
Total energy: -22655.0 ( -93.62 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_1PZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PZN-query.scw
PDB file :
Tito_Scwrl_1PZN.pdb
: