Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIETMSLDDMREYLGQDQIPEDFDDFWKKQTMKY-QGNIEYRLDKKDFNITFAQAYDLHFKGSNDSIVYAKCLFPKTNKPYPVVFYFHGYQNQSPDWS--DQLNYVAAGYGVVSMDVRGQAGQSQDKGHFDGITVKGQIVRGMISGPNHLFYKDIYLDVFQLIDIIATLESVDSNQLYSYGWSQGGALALIAAALN--PKIVKTVAVYPFLSDFRRVLDLGGVSEPYDELFRYFKY-SDPFHKTENSVLKTLAYIDVKNFAHRISCPVVLLTALKDDICPPSTQFAIFNRLTSTKKHLLLPDYGHDPMTVQVKDYIFDQLTGSQFTKQKIE |
3FVT Chain:B ((6-299)) | ----LSLEELKKYKPKKTARPDFSDFWKKSLEELRQVEAEPTLESYDYPVKGVKVYRLTYQSFGHSKIEGFYAVPDQTGPHPALVRFHGY-NASYDGGIHDIVNWALHGYATFGMLVRGQGG-SEDTSVTPGGHALGWMTKGILSKDTY-YYRGVYLDAVRALEVIQSFPEVDEHRIGVIGGSQGGALAIAAAALSDIPKVV--VADYPYLSNFERAVDV-ALEQPYLEINSYFRRNSDP--KVEEKAFETLSYFDLINLAGWVKQPTLMAIGLIDKITPPSTVFAAYNHLETDKDLKVYRYFGHEFIPAFQTEKLSFLQKHLLL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215392 for 2562 contacts (-84.1/contact) +
2D Compatibility (PS) -31400 + (NN) -17813 + (LL) 1728
1D Compatibility (HY) -16800 + (ID) 5250
Total energy: -284927.0 ( -111.21 by residue)
QMean score : 0.529
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