Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIK-WFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSK-TKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAV----ILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAAFNKLLPEVQLDAAVSRNFSKSFDIFENRIQNKALSKIVVLAVGVNSLDNYKTDLSQFIKSLPKGHRLIIVTPYNAKNMSQVTTVRDYELSLMKKYNYITVADWYKVATEHPEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
| 4QLA Chain:A ((19-442)) | LDLEEWWGP------------PELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGVGF--KYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRITPKVPKGVEIVPLLLLHGWPGSVREFYEAIPHLT-----AVSKDRN---FALEIIAPSLPGYGFSDAAVR-------------------PGLAAAEVAVI--FKNLMARLGYK--------QYYVQGGDWGALIGSAMATFFPKE---IIGFHSN---MALTLSPAATFLEFVGALFPSLIVE--PELANRLYPLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRSKEDGGLSYR-WT------------------------KDQLIDNLMLYWSTKSIVTSMRLYAES---------------FSSRHFDLKLDEIQV-------------------------QVPTWVLQAKHELAYQP-----------------------------------PCILKMKYPKLVNASVIE------------DGGHFLAFEL--PEIFAKDVLKAIGEFRKLKN- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -323553 for 3486 contacts (-92.8/contact) +
2D Compatibility (PS) -43327 + (NN) -4247 + (LL) 13148
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -374279.0 ( -107.37 by residue)
QMean score : 0.272
|
|
|