Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRYKAQISYDGSAFSGFQRQPNCRTVQEEIERTLKRLNSGNDVIIHGAGRTDAGVHAYGQVIHFDLPQARDVEKLRFGLDTQCPDDIDIVKVEQVSDDFHCRYDKHIKTYEFLVDIGRPKNPMMRNYATHYPYPVIIELMQEAIKDLVGTHDFTGFTASGTSVENKVRTI-FDAKIQFEASKNLLI----FTFTGNGF---------LYKQVRNMVGTLLKIGNGRMPISQIKTILQAKNRDLAGPTAAGNGLYL-KEIIYEDKECFSNFRK |
| 2X4J Chain:A ((16-136)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------FFTNKIGCNVSSPLKHVDIVGEIVEEAVYNFLIDAGDKMCVGNKIGVWKVSRKSLYAKVPKGIGVTVYLANGRVQ-GRLIDI----GVYEVLVEEVGDIIYIHKDLVY--ALCWPK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28147 for 630 contacts (-44.7/contact) +
2D Compatibility (PS) -9541 + (NN) 3682 + (LL) 10680
1D Compatibility (HY) -8400 + (ID) 1150
Total energy: -32876.0 ( -52.18 by residue)
QMean score : 0.220
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