Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHD--------------TTEIEIAMK-RPYRYDYGQFTFLKIYQAGF----------ESAAHPFSISGGHD------RVIFLTVKA----------SGDYTKSIYKQLKVGTKIALDRAYGH-MLFDK--DKKEQVWIAGGIGITPFISFIRENSILT-----KRVDFFYTFSNQDNLIYQDMLESYAKANPNFKLHLNNSSLQ------GRLDFSQ-------SVF---EGQPTIFMCG-PTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 2RC5 Chain:A ((22-313)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYNGNIQFKGVCSNYMC-DLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKI-SGNTGTYEEFKHHLEGAHQLFVETY--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149691 for 1843 contacts (-81.2/contact) +
2D Compatibility (PS) -23939 + (NN) -1378 + (LL) 20752
1D Compatibility (HY) -12000 + (ID) 2450
Total energy: -168706.0 ( -91.54 by residue)
QMean score : 0.503
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