Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDRQIQKTKVAIYNAFISLLQENDYSKITVQDVIGLANVGRSTFYSHYESKEVLLKELCEDLFHHLFKQGR-------DVTFEEYLVHILK----HFEQNQDSIATLLLSD-D---PYFLLRFRSELEHDVYPRLREEYI-T-KVDIPEDFLKQFLLSSFIETLKWWLHQRQKMTVEDLLKYYLTMVER
3COL Chain:A ((10-175))
--------NKQVKIQDAVAAIILAEGPAGVSTTKVAKRVGIAQSNVYLYFKNKQALIDSVYARETNRILSTTDLDRLSDSTIDVTTRIRLYVQQVYDYSLANPDSLTIIQQIKALNGQ-------DADPNNIVANLLTAAIDAKVIKQLPVSLHMGVVFSTIHTHTTNISKGRYAQDQYTFGDIFQMIWDA
General information:
TITO was launched using:
RESULT:
Template:
3COL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74001 for 944 contacts (-78.4/contact) +
2D Compatibility (PS) -15059 + (NN) -8890 + (LL) 1600
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -101550.0 ( -107.57 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_3COL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3COL-query.scw
PDB file :
Tito_Scwrl_3COL.pdb
: