Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTLKLMFSFLLMLGTMFGISQTVLAQETHQLTIVHLEARDIDRPNPQLEIAPKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNVSAFLVDLSEDKVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRV-------KNGVHSQDI---DAAKHLETDSSGHIRISGLIHG----------DYVLKEIETQSGYQIGQAETAVTIEKSKTVTVTIENKKVPTPKVPSRGGLIPKTGEQQAMALVIIGGILIALALRLLSKHRKHQNKD |
| 3PF2 Chain:A ((181-294)) | --------------------------------------------------------------------------------------------------------------------------------------------------------TGGKRFVKKDSTE--TQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTAVTYKLKETKAPEGYVIPDKEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNKR---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6356 for 598 contacts (-10.6/contact) +
2D Compatibility (PS) -10197 + (NN) -343 + (LL) 13576
1D Compatibility (HY) -1600 + (ID) 1150
Total energy: -6070.0 ( -10.15 by residue)
QMean score : 0.341
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