Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIILQGNKIERSFSGDVLFDNINIQVDQRDRIALVGRNGAGKSTLLKILVGEETPTKGEINKKRDLSLSYLAQDSRFQSENTIFQEMLQVFDSLREVEKRLRELELQMGQVSGSDLEQLMKTYDILSEEFREKGGFTYESDIKAILNGFKFNSDMWEMPISELSGGQNTRLALAKMLLEK--PELLVLDEPTNHLDIDTIAWLENYLVNY---QGALIIVSHDRYFLDKVATVTYDL------TTHSLDRYVGNYSKFMDLKAEKIATEEKNFEKQQKEIAKLEDFVQRNIVRASTTKRAQARRKQLEKMERLDKPNVEQKSANMTFHAGKVSGNVVLTLENAAIGYEGVSLSELIDLDVKKFDAIAIVGPNGIGKSTLIKS-LVGQIPF----IKGEAKLGANV------------------------ETGYYDQSQSNLTK----------------------------------------------------------------TNTVLDELWNAFS-------T-TPEVEIRNRLGAFLFSGDDVKKLVSMLSGGERARLLLAKLSMEN---NNFLILDEPTNHLDIDSKEVLENALIEF---DGTLLFVSHDRYFINRVATKVLEIS-----DKGSTLYLGDYDYYLTKKAELEELARLNEEEVSASKTEIDVTSDYETQKANQKEFRKITRRIAEIEVRLEVLENNENNINGLMLETNDIGKLSDLQKELESIQEEQLLLMEEWENLNMRLDL |
| 2VF7 Chain:A ((363-829)) | -------------------------------------------------------------------------------------------------------------------------------------------------LLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALENLKRGGNSLFVVEHDLDVIRR-ADWLVDVGPEAGEKGGEILY-SGPPEGLKHVPESQTG-----------------QYL--------------------FAD---R-HT--EP--H-----TPREPAGWLELNGVTR-----NNLDNLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQ--GSARLGGDLAQITRLVRVDQKPIGRTPRSNMATYTGLFDQVRKLFAATPLAKKRGYNAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGTRYNAETLEVEYRGKNIADVLALTVDEAHDFFADESAIFRALDTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGGTVYVLDEPTTGLHPADVERLQRQLVKLVDAGNTVIAVEHKMQVVA-ASDWVLDIGPGAGEDGGRLVAQGTPAEVAQAAGSVTAPYLRAALR------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82086 for 2411 contacts (-34.0/contact) +
2D Compatibility (PS) -34583 + (NN) -3515 + (LL) 24188
1D Compatibility (HY) -13200 + (ID) 3700
Total energy: -112896.0 ( -46.83 by residue)
QMean score : 0.335
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