Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
3BBF Chain:D ((3-134))
LERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCI-----QVGRNIIHGSDSVKSAEKEISLWFKP
General information:
TITO was launched using:
RESULT:
Template:
3BBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69529 for 1002 contacts (-69.4/contact) +
2D Compatibility (PS) -13865 + (NN) -3967 + (LL) -244
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -104355.0 ( -104.15 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3BBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBF-query.scw
PDB file :
Tito_Scwrl_3BBF.pdb
: