Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIEKTNRMNALFEFYAALLTDKQMNYIELYYA----DDYSLAEIAEESGVSRQAVYDNIKRTEKILEAYEMKLHMYSDYIVRSQIFDDILEKYTDDAFLQEKISILSSIDNRD
1KU3 Chain:A ((368-428))
-----------ELEKALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHES------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19674 for 359 contacts (-54.8/contact) +
2D Compatibility (PS) -5970 + (NN) 1906 + (LL) 4224
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -18764.0 ( -52.27 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_1KU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KU3-query.scw
PDB file :
Tito_Scwrl_1KU3.pdb
: