Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTVYLSLGSNIGDRETFLKQALFSIDHLQKTKVAQISAIYETAAWGNTNQEDFFNICCQVETDLAPFELLDYCQEIEKRLKRVRH-EHWGPRTIDIDILLFGNQVINQEDLVVPHPYMTKRAFVLVPLLEIAPQLSLPNGSKLEDYL-----EKLNLGEVHYLKPVE
3HSJ Chain:A ((1-156))
-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLAAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW---------
General information:
TITO was launched using:
RESULT:
Template:
3HSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129913 for 1120 contacts (-116.0/contact) +
2D Compatibility (PS) -15997 + (NN) -7041 + (LL) 744
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -169907.0 ( -151.70 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3HSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSJ-query.scw
PDB file :
Tito_Scwrl_3HSJ.pdb
: