Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MSKKDKKIEIQISDAQVTVNGTKVDGYQLVIGKKIVGQIAELDSKFAVIKGEQVSGFYK-NLDQAMGNIIEEYNLNR---------------
4G7X Chain:A ((3-94))
INCDPNTTTSHQLLFGFGSPIVQSVLFDGCMLDIEKDDYGFVWSCLSNE---NGDYCKGLYKPRFTQGVSPNWPMCDLSGASAERCIYPYCPEGE
General information:
TITO was launched using:
RESULT:
Template:
4G7X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3788 for 415 contacts (9.1/contact) +
2D Compatibility (PS) -7324 + (NN) 2355 + (LL) 540
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -5741.0 ( -13.83 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_4G7X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G7X-query.scw
PDB file :
Tito_Scwrl_4G7X.pdb
: