Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEDIKKQVRRAFDFRMAIRVYNNNDIPKEDMEYILDTAWLSPSSVGLEGWRFLVLDRQTIAKFRDKLKEVAWG-AQYQLDTASHFVLLLAEKG-AYYNADSMINSLVRRGLGDPAALESRIPLYKSFQ-ENDMKIDSERSLWDWTAKQTYIALGNMMTAAAMIGVDSCPIEGFDYEKVNNILSKEGLIDDKKEAISCMVSFGYRLREPKHSRARKERQEVITWVE
2HAY Chain:A ((8-224))
-----IHHQIQQALHFRTAVRVYKEEKISDEDLALILDAAWLSPSSIGLEGWRFVVLDNKPI---KEEIKPFAWGAQY-QLETASHFILLIAEKHARYDSPAIKNSLLR-RGIKEGDGLNSRLKLYESFQKEDMDMADNPRALFDWTAKQTYIALGNMMMTAALLGIDTCPIEGFHYDKVNHILAKHNVIDLEKEGIASMLSLGYRLRDPKHAQVRKPKEEVMSVVK
General information:
TITO was launched using:
RESULT:
Template:
2HAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94585 for 1540 contacts (-61.4/contact) +
2D Compatibility (PS) -22739 + (NN) -4019 + (LL) 884
1D Compatibility (HY) -24400 + (ID) 5850
Total energy: -150709.0 ( -97.86 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_2HAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HAY-query.scw
PDB file :
Tito_Scwrl_2HAY.pdb
: