Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYL-YNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVIS-GMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK
3BKP Chain:A ((21-192))--------------------------------------------------------------------------RGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGG------ADTTFD-GKPFDVETHPRLKFRYRGLVGVANLG--TNGNQFFITLARAD------------------------VLNNAYTLFGKVTGHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFED


General information:
TITO was launched using:
RESULT:

Template: 3BKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53848 for 1228 contacts (-43.9/contact) +
2D Compatibility (PS) -16956 + (NN) -9362 + (LL) 6840
1D Compatibility (HY) -14000 + (ID) 3250
Total energy: -90576.0 ( -73.76 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_3BKP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BKP-query.scw
PDB file : Tito_Scwrl_3BKP.pdb: