Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIGIIVVSHSKNIAQGVVDLISEVA-KDVSITYVGGTEDGEIGTS----FDQVQQIVEQ--NDKKTLLAFFDL--GSAKMNLELVADFSEKNIIINSVPVVEGAYTAAALLQAGADLDSIQSQLAELTINK
3LFH Chain:A ((1-84))
MKEKFVLIITHG-DFGKGLLSGAEVIIGKQENVHTVG----LNLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMMKEYDVKVITGINMPMLVELLTSINVYDTTELLENISKIGKDGIKV
General information:
TITO was launched using:
RESULT:
Template:
3LFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41791 for 462 contacts (-90.5/contact) +
2D Compatibility (PS) -8318 + (NN) -3868 + (LL) -28
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -59505.0 ( -128.80 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_3LFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFH-query.scw
PDB file :
Tito_Scwrl_3LFH.pdb
: