Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALEVTDATFVEET--KEGLVLIDFWATWCGPCRMQAPILEQLSQEIDEDELKILKMDVDENPETARQFGIMSIPTLMFKKDGEVVKQVAGVHTKDQLKAIIAELS
2YJ7 Chain:A ((4-102))
--IEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEY-EGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL
General information:
TITO was launched using:
RESULT:
Template:
2YJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50544 for 680 contacts (-74.3/contact) +
2D Compatibility (PS) -9910 + (NN) 2247 + (LL) 276
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -71331.0 ( -104.90 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_2YJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YJ7-query.scw
PDB file :
Tito_Scwrl_2YJ7.pdb
: