Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MAKFGFLSVLEEELDKHLQYDFAMDWDKKNHTV-----EVTFILEAQNSSAIETVDDQGETSSEDIVFEDYVLFYNPVKSRFDAEDYLVTIPYEPKKGLSREFLAYFAETLNEVATEGLSDLMDFLTDDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3LNL Chain:B ((1-370)) | AMDPMK-IADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCT--LEVVNEAIEKGYNTIISHHPLIFKGVTSLKANG-----YGLIIRKLIQHDINLIAMHTNLDVNPHG-------VNMMLAKVMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEYCFFESEGRGQEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGVMAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKTLLMNWFNIEKINIDVEASTINTDPFQYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2483 for 868 contacts (-2.9/contact) +
2D Compatibility (PS) -14105 + (NN) 4278 + (LL) 1428
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -18932.0 ( -21.81 by residue)
QMean score : 0.116
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