Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQVRLVDVLPEE-NKEKAIQLAGQIDHKNMQSIVLYGSQAQSKLLNFSHDMINHVQKKDVGEIGEILGELMKKLEQVNPDD-----LQSKKKGF-LARMFGRVSSSLQEVLSKYQ--------KTSVQIDRISLKLEHSKNALISDNKLL----EQLYEKNKEYFAALNVYIAAGELKLEELKTKTIPELKQQAESSDHNQMAVQEVNDLIQFADRLDKRVHDLLLSRQ---ITIQSAPQIRLIQNTNQALAEKIQSSIVTAIPLWKNQVAIALTL-------LRQRNAVDAQQKVSDTTNELLLKN---AELLKTNTIETARANERGLVDIDTLKKVQESLISTLEETLTIQEEGRIKRRQAEEELMMMEGDLKQKLITIKER--------------------------- |
| 4QIQ Chain:A ((7-470)) | ------SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 117976 for 2977 contacts (39.6/contact) +
2D Compatibility (PS) -40402 + (NN) -13907 + (LL) 244
1D Compatibility (HY) -16800 + (ID) 2450
Total energy: 44661.0 ( 15.00 by residue)
QMean score : 0.218
|
|
|