Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MQF-----------QIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAIL---HGDEVRLIADS--DFSDLVAVKKDEQMMRKKKDESRMNE----SLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGH-DAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIPHLDQLVIFAGACQSHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRI-GMPYKSN |
| 4DO7 Chain:A ((3-289)) | ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQ--ALGASIAVQARAGRDETAFLLELACDEARIAAVVGWEDL-RAPQLAERVAEWRGTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDTALARWRAALRELAALPHVVCKLSGLVTEADWRRGLR-----------------------ASDLRHIEQCLDAALDAFG-PQRLMFGSDWPVCLLAA-SYDEVASLVERWAESRLSAAERSALWG---GTAARCYALP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34435 for 2079 contacts (-16.6/contact) +
2D Compatibility (PS) -26278 + (NN) 3656 + (LL) 3400
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -63157.0 ( -30.38 by residue)
QMean score : 0.152
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