Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKINL----SLDVTRKRPDGYHEVEMIMTTIDLADRIELTELAEDEVRVSSHN-RFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEHP-----DVQGMIEAIEEKSFQKMCSRLGNVL-ESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 3PYF Chain:A ((5-282)) | -SVTVRVPGKVNLYLAVGDRRE----DGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLA-PLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAG---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140526 for 2212 contacts (-63.5/contact) +
2D Compatibility (PS) -29247 + (NN) -9138 + (LL) 1696
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -194815.0 ( -88.07 by residue)
QMean score : 0.481
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