Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAKASSDVKPGDELTVRFGQKLVTVQVNELKDTTKKEEAANMYTILKEEKLGE
3DH3 Chain:A ((7-55))
VRLNKYISESGICSRR-EADRYIEQGNVFLNGKRATIGDQVKPGDVVKVN------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15451 for 331 contacts (-46.7/contact) +
2D Compatibility (PS) -5131 + (NN) -857 + (LL) 3132
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -23207.0 ( -70.11 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3DH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DH3-query.scw
PDB file :
Tito_Scwrl_3DH3.pdb
: