Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAPKLPTVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVE--------------------------LVLNWTPKLQSLSTLFAKLSTGGITP----TGPAIREATL---QFEKI-RSRRGMLADDERRFDEFGM |
| 3V4V Chain:B ((129-274)) | --------------------------------------------------------------------------------------------------------------------------------EGYPVDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54183 for 749 contacts (-72.3/contact) +
2D Compatibility (PS) -11126 + (NN) 442 + (LL) 9852
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -61565.0 ( -82.20 by residue)
QMean score : 0.454
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