Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKARSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIITAIKTATRQKHIPLNS-------------------------------------------------YASLDKPIFDEESDRTLLDVISGAKTLNPEEMIINQEEFDDIEMKMGELLSDLERKVLVL-YL----DGRSYQEISDELNRHVKSIDNALQRVKRKLEKYLEIREISL |
| 1L9Z Chain:H ((193-430)) | ----------------------------REGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLKIAQEPVSLETPI----------DFIPDENLPSPVEAAAQSLLSEELEKAL-SKLSEREAMVLKLRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESRT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40129 for 977 contacts (-41.1/contact) +
2D Compatibility (PS) -18040 + (NN) 77 + (LL) 3044
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -57748.0 ( -59.11 by residue)
QMean score : 0.116
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