Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKKITLACKTCGNRNYTTMKSS-----ASAAERLEVKKYCSTCNSHTAHLETK-----------
1LV3 Chain:A ((4-68))
MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEEKRIPSSGDLSESDDWSEEPKQ
General information:
TITO was launched using:
RESULT:
Template:
1LV3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5862 for 213 contacts (27.5/contact) +
2D Compatibility (PS) -4988 + (NN) 396 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -1130.0 ( -5.31 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1LV3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LV3-query.scw
PDB file :
Tito_Scwrl_1LV3.pdb
: